#!/bin/sh # # Rotation search (full) for toxd using an ensemble of two models. # The two models are 1BIK.pdb and the B chain of 1D0D.pdb # The models must be aligned to each other: # here 1BIK has been aligned to the B chain of 1D0D.pdb # # This test job happens to find the right orientation by luck, but the # sampling of orientations is much too coarse. The program will provide # a sensible default based on size and resolution, which would be 5 degrees # in this case. # beast HKLIN $CEXAM/toxd/toxd.mtz << eof LABIN F=FTOXD3 MOLECULE mol1 1.0 MODEL mol1 $CEXAM/data/1D0D_B.pdb IDENT 0.364 MODEL mol1 $CEXAM/data/1BIK_2_1D0D_B.pdb IDENT 0.377 SEARCH mol1 ROTATE FULL 8. BEST 20 END eof